Protein ZmMTERF22 | |
---|---|
Information | |
TF Name: | ZmMTERF22 |
Species: | Maize |
TF Family: | mTERF |
Gene Name(Synonym): | MTERF22 |
Uniprot ID: | B4FEU9 |
Subgenome: | 1 |
ZmMTERF22 is a protein in the mTERF family.
Overview of domains present in v5 transcripts | |
---|---|
PF02536 | |
Zm00001eb287710_T002 | |
Zm00001eb287710_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d038158 | DAPseq | sequence | fimo | position | |
Zm00001d038158 | DAPseq | sequence | fimo | position | |
Zm00001d038158 | ChIPseq | sequence | fimo | position | |
Zm00001d038158 | PChIPseq | sequence | fimo | position |
MLANVCRRRLTIPLSPILAAAAAAASGKNPIHSNHARALLSQSYYSSAVQAAPDREPCPTTVSYLVSCGVSPAVAAARKV
RIRDTDRADAVRALLRKYGFSEADITRTVRLDPLLLTFDPDRTIRPKLDFFVSLGIQPRLLATEPHILARSLEKHIIPCI
EFFRTILRTDDNIRIAVSRVPRALMTDIESTMRPAVEAFLSHGLSMEAIAKLLMIHMGMIKTPPERIREAFHDLKALGLR
VTDTGFLYGFRVICSLRRETMVRKVAVFKSFGVSESDLFRAFKTQPTILLVGDETIKKKFRFFLDVMKLEIADVMAQPLT
LALSLEKNIMPRCAVLSILMKEGKLKRTQKLIPPLLSNSRVFSERYVLRHAKDVPDVVKAFEGKIKFQGFGESEVRTSVP
LND
MLANVCRRRLTIPLSPILAAAAAAASGKNPIHSNHARALLSQSYYSSAVQAAPDREPCPTTVSYLVSCGVSPAVAAARKV
RIRDTDRADAVRALLRKYGFSEADITRTVRLDPLLLTFDPDRTIRPKLDFFVSLGIQPRLLATEPHILARSLEKHIIPCI
EFFRTILRTDDNIRIAVSRVPRALMTDIESTMRPAVEAFLSHGLSMEAIAKLLMIHMGMIKTPPERIREAFHDLKALGLR
VTDTGFLYGFRVICSLRRETMVRKVAVFKSFGVSESDLFRAFKTQPTILLVGDETIKKKFRFFLDVMKLEIADVMAQPLT
LALSLEKNIMPRCAVLSILMKEGKLKRTQKLIPPLLSNSRVFSERYVLRHAKDVPDVVKAFEGKIKFQGFGESEVRTSVP
LND
MLANVCRRRLTIPLSPILAAAAAAASGKNPIHSNHARALLSQSYYSSAVQAAPDREPCPTTVSYLVSCGVSPAVAAARKV
RIRDTDRADAVRALLRKYGFSEADITRTVRLDPLLLTFDPDRTIRPKLDFFVSLGIQPRLLATEPHILARSLEKHIIPCI
EFFRTILRTDDNIRIAVSRVPRALMTDIESTMRPAVEAFLSHGLSMEAIAKLLMIHMGMIKTPPERIREAFHDLKALGLR
VTDTGFLYGFRVICSLRRETMVRKVAVFKSFGVSESDLFRAFKTQPTILLVGDETIKKKFRFFLDVMKLEIADVMAQPLT
LALSLEKNIMPRCAVLSILMKEGKLKRTQKLIPPLLSNSRVFSERYVLRHAKDVPDVVKAFEGKIKFQGFGESEVRTSVP
LND
MLANVCRRRLTIPLSPILAAAAAAASGKNPIHSNHARALLSQSYYSSAVQAAPDREPCPTTVSYLVSCGVSPAVAAARKV
RIRDTDRADAVRALLRKYGFSEADITRTVRLDPLLLTFDPDRTIRPKLDFFVSLGIQPRLLATEPHILARSLEKHIIPCI
EFFRTILRTDDNIRIAVSRVPRALMTDIESTMRPAVEAFLSHGLSMEAIAKLLMIHMGMIKTPPERIREAFHDLKALGLR
VTDTGFLYGFRVICSLRRETMVRKVAVFKSFGVSESDLFRAFKTQPTILLVGDETIKKKFRFFLDVMKLEIADVMAQPLT
LALSLEKNIMPRCAVLSILMKEGKLKRTQKLIPPLLSNSRVFSERYVLRHAKDVPDVVKAFEGKIKFQGFGESEVRTSVP
LND
MLANVCRRRLTIPLSPILAAAAAAASGKNPIHSNHARALLSQSYYSSAVQAAPDREPCPTTVSYLVSCGVSPAVAAARKV
RIRDTDRADAVRALLRKYGFSEADITRTVRLDPLLLTFDPDRTIRPKLDFFVSLGIQPRLLATEPHILARSLEKHIIPCI
EFFRTILRTDDNIRIAVSRVPRALMTDIESTMRPAVEAFLSHGLSMEAIAKLLMIHMGMIKTPPERIREAFHDLKALGLR
VTDTGFLYGFRVICSLRRETMVRKVAVFKSFGVSESDLFRAFKTQPTILLVGDETIKKKFRFFLDVMKLEIADVMAQPLT
LALSLEKNIMPRCAVLSILMKEGKLKRTQKLIPPLLSNSRVFSERYVLRHAKDVPDVVKAFEGKIKFQGFGESEVRTSVP
LND
MLANVCRRRLTIPLSPILAAAAAAASGKNPIHSNHARALLSQSYYSSAVQAAPDREPCPTTVSYLVSCGVSPAVAAARKV
RIRDTDRADAVRALLRKYGFSEADITRTVRLDPLLLTFDPDRTIRPKLDFFVSLGIQPRLLATEPHILARSLEKHIIPCI
EFFRTILRTDDNIRIAVSRVPRALMTDIESTMRPAVEAFLSHGLSMEAIAKLLMIHMGMIKTPPERIREAFHDLKALGLR
VTDTGFLYGFRVICSLRRETMVRKVAVFKSFGVSESDLFRAFKTQPTILLVGDETIKKKFRFFLDVMKLEIADVMAQPLT
LALSLEKNIMPRCAVLSILMKEGKLKRTQKLIPPLLSNSRVFSERYVLRHAKDVPDVVKAFEGKIKFQGFGESEVRTSVP
LND
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
---|---|
PF02536 |
|
PF02536 |
|
Hover here to show all domains |
AAAACACGATACGGTGGCCTTCCCT...
AAAACACGATACGGTGGCCTTCCCTGCTCACACACAGCGAATCAACGCTGAATTCACCATCCAACGGACTGCACCCAACATGCTTGCGAACGTCTGCCGGCGGCGGCTCACCATCCCCCTCTCCCCAATCCTCGCCGCCGCCGCCGCCGCCGCCAGCGGCAAGAATCCCATCCACTCCAACCACGCGCGCGCCCTCCTCTCTCAAAGCTACTACTCGTCCGCCGTTCAGGCGGCGCCCGACCGCGAGCCCTGCCCCACTACGGTCTCCTACCTGGTTTCCTGCGGTGTCTCCCCCGCCGTCGCCGCCGCTCGCAAGGTCCGCATCCGGGACACGGACCGGGCCGACGCAGTTCGGGCCCTCCTGCGCAAGTACGGCTTCTCCGAGGCGGATATCACCCGCACGGTGCGTTTAGACCCGCTGCTGCTCACCTTCGATCCAGACCGCACCATTCGCCCCAAGCTCGACTTCTTCGTCTCGCTCGGGATCCAGCCCCGCTTGCTCGCCACCGAGCCCCACATCCTCGCCCGCAGCCTGGAAAAACACATCATACCCTGCATCGAGTTTTTCCGCACCATCCTTCGTACCGATGACAACATCCGCATCGCCGTCTCCCGCGTGCCCCGCGCGCTCATGACCGATATCGAGAGCACCATGCGCCCCGCCGTCGAGGCGTTCCTCAGCCACGGTCTCTCCATGGAAGCCATCGCCAAGCTTCTCATGATTCACATGGGAATGATCAAGACACCGCCGGAGCGCATCCGCGAGGCCTTCCATGACCTCAAGGCGCTCGGCCTCCGCGTCACGGATACGGGCTTCCTCTACGGCTTCCGCGTCATTTGCAGCCTTAGGAGGGAGACTATGGTGCGCAAGGTGGCGGTTTTCAAGAGCTTCGGGGTGTCCGAATCTGACCTTTTCAGGGCGTTCAAGACGCAGCCCACCATACTGCTCGTCGGAGATGAGACCATAAAGAAGAAGTTCAGGTTTTTCTTGGATGTGATGAAGCTTGAGATAGCTGATGTGATGGCGCAGCCACTGACTCTGGCGTTGAGCTTGGAGAAGAATATCATGCCAAGGTGCGCCGTGCTGAGCATATTGATGAAGGAGGGTAAGCTTAAGCGGACACAGAAGTTGATTCCACCACTGCTTTCCAATTCTAGGGTCTTCTCGGAGAGGTATGTGTTGAGGCATGCTAAGGATGTGCCTGATGTTGTTAAGGCATTTGAGGGCAAGATTAAATTTCAAGGGTTTGGGGAATCAGAGGTTAGGACTTCTGTGCCACTGAATGACTGAAGCCCAAACCCCAGGATTCTGAAATCATGCTTATTTGTTAGAGGTAAGGCAGATCAATGCATGTTTGCAATTGTAATCTTGTTCCATTCATACTCATAGTGAAATGTCTATTTCTGGGGCCATGTCGAATGTCATGGTTTTGCATTTTTATGATACCCATGCATCCAGGAACATGTACGTTGTGACGTTCTCAGCTGTGGTCGATCTGGCATGTGTGGCCTGCCAGTTCTTAAATCATGCTGTGGTTCATATGCTTATGACCCGGATGGATTTGTTCATTTTGAAACTCTGATTATTTGTACTGCTCTGCTGAGTGGAAATGCTCATGTTACTGGAAGTTCTGTGATTTTCTTCTCTCCCCAAATGTAATATTCACCCTATCGATTTTGTTTTGGTTAGTGAGAACTATGCTGATGATGTGCCAGTCCTCCGGATATGTTATGGTATTTTAGTGTAGTTAAATCTGATCACGTATGGGGAATCTGAATATTTGTGACTGGAGTCAATCTGATTCTTCTGAGATCAAATTTGTTCTTTGTTAGGGACCATCTTTCATTTCAGACAAATTTGTTGTGAGGCGGAAGTC
MLANVCRRRLTIPLSPILAAAAAAASGKNPIHSNHARALLSQSYYSSAVQAAPDREPCPTTVSYLVSCGVSPAVAAARKV
RIRDTDRADAVRALLRKYGFSEADITRTVRLDPLLLTFDPDRTIRPKLDFFVSLGIQPRLLATEPHILARSLEKHIIPCI
EFFRTILRTDDNIRIAVSRVPRALMTDIESTMRPAVEAFLSHGLSMEAIAKLLMIHMGMIKTPPERIREAFHDLKALGLR
VTDTGFLYGFRVICSLRRETMVRKVAVFKSFGVSESDLFRAFKTQPTILLVGDETIKKKFRFFLDVMKLEIADVMAQPLT
LALSLEKNIMPRCAVLSILMKEGKLKRTQKLIPPLLSNSRVFSERYVLRHAKDVPDVVKAFEGKIKFQGFGESEVRTSVP
LND
AAAACACGATACGGTGGCCTTCCCT...
AAAACACGATACGGTGGCCTTCCCTGCTCACACACAGCGAATCAACGCTGAATTCACCATCCAACGGACTGCACCCAACATGCTTGCGAACGTCTGCCGGCGGCGGCTCACCATCCCCCTCTCCCCAATCCTCGCCGCCGCCGCCGCCGCCGCCAGCGGCAAGAATCCCATCCACTCCAACCACGCGCGCGCCCTCCTCTCTCAAAGCTACTACTCGTCCGCCGTTCAGGCGGCGCCCGACCGCGAGCCCTGCCCCACTACGGTCTCCTACCTGGTTTCCTGCGGTGTCTCCCCCGCCGTCGCCGCCGCTCGCAAGGTCCGCATCCGGGACACGGACCGGGCCGACGCAGTTCGGGCCCTCCTGCGCAAGTACGGCTTCTCCGAGGCGGATATCACCCGCACGGTGCGTTTAGACCCGCTGCTGCTCACCTTCGATCCAGACCGCACCATTCGCCCCAAGCTCGACTTCTTCGTCTCGCTCGGGATCCAGCCCCGCTTGCTCGCCACCGAGCCCCACATCCTCGCCCGCAGCCTGGAAAAACACATCATACCCTGCATCGAGTTTTTCCGCACCATCCTTCGTACCGATGACAACATCCGCATCGCCGTCTCCCGCGTGCCCCGCGCGCTCATGACCGATATCGAGAGCACCATGCGCCCCGCCGTCGAGGCGTTCCTCAGCCACGGTCTCTCCATGGAAGCCATCGCCAAGCTTCTCATGATTCACATGGGAATGATCAAGACACCGCCGGAGCGCATCCGCGAGGCCTTCCATGACCTCAAGGCGCTCGGCCTCCGCGTCACGGATACGGGCTTCCTCTACGGCTTCCGCGTCATTTGCAGCCTTAGGAGGGAGACTATGGTGCGCAAGGTGGCGGTTTTCAAGAGCTTCGGGGTGTCCGAATCTGACCTTTTCAGGGCGTTCAAGACGCAGCCCACCATACTGCTCGTCGGAGATGAGACCATAAAGAAGAAGTTCAGGTTTTTCTTGGATGTGATGAAGCTTGAGATAGCTGATGTGATGGCGCAGCCACTGACTCTGGCGTTGAGCTTGGAGAAGAATATCATGCCAAGGTGCGCCGTGCTGAGCATATTGATGAAGGAGGGTAAGCTTAAGCGGACACAGAAGTTGATTCCACCACTGCTTTCCAATTCTAGGGTCTTCTCGGAGAGGTATGTGTTGAGGCATGCTAAGGATGTGCCTGATGTTGTTAAGGCATTTGAGGGCAAGATTAAATTTCAAGGGTTTGGGGAATCAGAGGTTAGGACTTCTGTGCCACTGAATGACTGAAGCCCAAACCCCAGGATTCTGAAATCATGCTTATTTGTTAGAGGTAAGGCAGATCAATGCATGTTTGCAATTGTAATCTTGTTCCATTCATACTCATAGTGAAATGTCTATTTCTGGGGCCATGTCGAATGTCATGGTTTTGCATTTTTATGATACCCATGCATCCAGGAACATGTACGTTGTGACGTTCTCAGCTGTGGTCGATCTGGCATGTGTGGCCTGCCAGTTCTTAAATCATGCTGTGGTTCATATGCTTATGACCCGGATGGATTTGTTCATTTTGAAACTCTGATTATTTGTACTGCTCTGCTGAGTGGAAATGCTCATGTTACTGGAAGTTCTGTGATTTTCTTCTCTCCCCAAATGTAATATTCACCCTATCGATTTTGTTTTGGTTAGTGAGAACTATGCTGATGATGTGCCAGTCCTCCGGATATGTTATGGTATTTTAGTGTAGTTAAATCTGATCACGTATGGGGAATCTGAATATTTGTGACTGGAGTCAATCTGATTCTTCTGAGATCAAATTTGTTCTTTGTTAGGGACCATCTTTCATTTCAGACAAATTTGTTGTGAGGCGGAAGTCCA
MLANVCRRRLTIPLSPILAAAAAAASGKNPIHSNHARALLSQSYYSSAVQAAPDREPCPTTVSYLVSCGVSPAVAAARKV
RIRDTDRADAVRALLRKYGFSEADITRTVRLDPLLLTFDPDRTIRPKLDFFVSLGIQPRLLATEPHILARSLEKHIIPCI
EFFRTILRTDDNIRIAVSRVPRALMTDIESTMRPAVEAFLSHGLSMEAIAKLLMIHMGMIKTPPERIREAFHDLKALGLR
VTDTGFLYGFRVICSLRRETMVRKVAVFKSFGVSESDLFRAFKTQPTILLVGDETIKKKFRFFLDVMKLEIADVMAQPLT
LALSLEKNIMPRCAVLSILMKEGKLKRTQKLIPPLLSNSRVFSERYVLRHAKDVPDVVKAFEGKIKFQGFGESEVRTSVP
LND
ATGCTTGCGAACGTCTGCCGGCGGC...
ATGCTTGCGAACGTCTGCCGGCGGCGGCTCACCATCCCCCTCTCCCCAATCCTCGCCGCCGCCGCCGCCGCCGCCAGCGGCAAGAATCCCATCCACTCCAACCACGCGCGCGCCCTCCTCTCTCAAAGCTACTACTCGTCCGCCGTTCAGGCGGCGCCCGACCGCGAGCCCTGCCCCACTACGGTCTCCTACCTGGTTTCCTGCGGTGTCTCCCCCGCCGTCGCCGCCGCTCGCAAGGTCCGCATCCGGGACACGGACCGGGCCGACGCAGTTCGGGCCCTCCTGCGCAAGTACGGCTTCTCCGAGGCGGATATCACCCGCACGGTGCGTTTAGACCCGCTGCTGCTCACCTTCGATCCAGACCGCACCATTCGCCCCAAGCTCGACTTCTTCGTCTCGCTCGGGATCCAGCCCCGCTTGCTCGCCACCGAGCCCCACATCCTCGCCCGCAGCCTGGAAAAACACATCATACCCTGCATCGAGTTTTTCCGCACCATCCTTCGTACCGATGACAACATCCGCATCGCCGTCTCCCGCGTGCCCCGCGCGCTCATGACCGATATCGAGAGCACCATGCGCCCCGCCGTCGAGGCGTTCCTCAGCCACGGTCTCTCCATGGAAGCCATCGCCAAGCTTCTCATGATTCACATGGGAATGATCAAGACACCGCCGGAGCGCATCCGCGAGGCCTTCCATGACCTCAAGGCGCTCGGCCTCCGCGTCACGGATACGGGCTTCCTCTACGGCTTCCGCGTCATTTGCAGCCTTAGGAGGGAGACTATGGTGCGCAAGGTGGCGGTTTTCAAGAGCTTCGGGGTGTCCGAATCTGACCTTTTCAGGGCGTTCAAGACGCAGCCCACCATACTGCTCGTCGGAGATGAGACCATAAAGAAGAAGTTCAGGTTTTTCTTGGATGTGATGAAGCTTGAGATAGCTGATGTGATGGCGCAGCCACTGACTCTGGCGTTGAGCTTGGAGAAGAATATCATGCCAAGGTGCGCCGTGCTGAGCATATTGATGAAGGAGGGTAAGCTTAAGCGGACACAGAAGTTGATTCCACCACTGCTTTCCAATTCTAGGGTCTTCTCGGAGAGGTATGTGTTGAGGCATGCTAAGGATGTGCCTGATGTTGTTAAGGCATTTGAGGGCAAGATTAAATTTCAAGGGTTTGGGGAATCAGAGGTTAGGACTTCTGTGCCACTGAATGACTGA
MLANVCRRRLTIPLSPILAAAAAAASGKNPIHSNHARALLSQSYYSSAVQAAPDREPCPTTVSYLVSCGVSPAVAAARKV
RIRDTDRADAVRALLRKYGFSEADITRTVRLDPLLLTFDPDRTIRPKLDFFVSLGIQPRLLATEPHILARSLEKHIIPCI
EFFRTILRTDDNIRIAVSRVPRALMTDIESTMRPAVEAFLSHGLSMEAIAKLLMIHMGMIKTPPERIREAFHDLKALGLR
VTDTGFLYGFRVICSLRRETMVRKVAVFKSFGVSESDLFRAFKTQPTILLVGDETIKKKFRFFLDVMKLEIADVMAQPLT
LALSLEKNIMPRVFSERYVLRHAKDVPDVVKAFEGKIKFQGFGESEVRTSVPLND
GTGTGCGAATTAGGCCCGGTCCTGT...
GTGTGCGAATTAGGCCCGGTCCTGTGTCCTCTACGGCCATGCTCAAAACACGATACGGTGGCCTTCCCTGCTCACACACAGCGAATCAACGCTGAATTCACCATCCAACGGACTGCACCCAACATGCTTGCGAACGTCTGCCGGCGGCGGCTCACCATCCCCCTCTCCCCAATCCTCGCCGCCGCCGCCGCCGCCGCCAGCGGCAAGAATCCCATCCACTCCAACCACGCGCGCGCCCTCCTCTCTCAAAGCTACTACTCGTCCGCCGTTCAGGCGGCGCCCGACCGCGAGCCCTGCCCCACTACGGTCTCCTACCTGGTTTCCTGCGGTGTCTCCCCCGCCGTCGCCGCCGCTCGCAAGGTCCGCATCCGGGACACGGACCGGGCCGACGCAGTTCGGGCCCTCCTGCGCAAGTACGGCTTCTCCGAGGCGGATATCACCCGCACGGTGCGTTTAGACCCGCTGCTGCTCACCTTCGATCCAGACCGCACCATTCGCCCCAAGCTCGACTTCTTCGTCTCGCTCGGGATCCAGCCCCGCTTGCTCGCCACCGAGCCCCACATCCTCGCCCGCAGCCTGGAAAAACACATCATACCCTGCATCGAGTTTTTCCGCACCATCCTTCGTACCGATGACAACATCCGCATCGCCGTCTCCCGCGTGCCCCGCGCGCTCATGACCGATATCGAGAGCACCATGCGCCCCGCCGTCGAGGCGTTCCTCAGCCACGGTCTCTCCATGGAAGCCATCGCCAAGCTTCTCATGATTCACATGGGAATGATCAAGACACCGCCGGAGCGCATCCGCGAGGCCTTCCATGACCTCAAGGCGCTCGGCCTCCGCGTCACGGATACGGGCTTCCTCTACGGCTTCCGCGTCATTTGCAGCCTTAGGAGGGAGACTATGGTGCGCAAGGTGGCGGTTTTCAAGAGCTTCGGGGTGTCCGAATCTGACCTTTTCAGGGCGTTCAAGACGCAGCCCACCATACTGCTCGTCGGAGATGAGACCATAAAGAAGAAGTTCAGGTTTTTCTTGGATGTGATGAAGCTTGAGATAGCTGATGTGATGGCGCAGCCACTGACTCTGGCGTTGAGCTTGGAGAAGAATATCATGCCAAGGGTCTTCTCGGAGAGGTATGTGTTGAGGCATGCTAAGGATGTGCCTGATGTTGTTAAGGCATTTGAGGGCAAGATTAAATTTCAAGGGTTTGGGGAATCAGAGGTTAGGACTTCTGTGCCACTGAATGACTGAAGCCCAAACCCCAGGATTCTGAAATCATGCTTATTTGTTAGAGGTAAGGCAGATCAATGCATGTTTGCAATTGTAATCTTGTTCCATTCATACTCATAGTGAAATGTCTATTTCTGGGGCCATGTCGAATGTCATGGTTTTGCATTTTTATGATACCCATGCATCCAGGAACATGTACGTTGTGACGTTCTCAGCTGTGGTCGATCTGGCATGTGTGGCCTGCCAGTTCTTAAATCATGCTGTGGTTCATATGCTTATGACCCGGATGGATTTGTTCATTTTGAAACTCTGATTATTTGTACTGCTCTGCTGAGTGGAAATGCTCATGTTACTGGAAGTTCTGTGATTTTCTTCTCTCCCCAAATGTAATATTCACCCTATCGATTTTGTTTTGGTTAGTGAGAACTATGCTGATGATGTGCCAGTCCTCCGGATATGTTATGGTATTTTAGTGTAGTTAAATCTGATCACGTATGGGGAATCTGAATATTTGTGACTGGAGTCAATCTGATTCTTCTGAGATCAAATTTGTTCTTTGTTAGGGACCATCTTTCATTTCAGACAAATTTGTTGTGAGGCGGAAGTC
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